Color and retinal optics improve the prediction of occipital fMRI responses to natural scenes

Poster Presentation: Tuesday, May 20, 2025, 8:30 am – 12:30 pm, Pavilion
Session: Color, light and materials: Neural mechanisms, clinical

Jenny Bosten1, Chris Racey1, Kendrick Kay2, Ian Pennock1; 1University of Sussex, 2University of Minnesota

Color is an integral part of visual perception, yet it is often omitted from encoding models. Similarly, the retinal image deviates substantially from the RGB images typically used to train encoding models, yet the effect of retinal optics on the stimuli is often ignored. We built a Gabor wavelet pyramid-based encoding model that includes biologically plausible color and retinal optics generated using ISETBio (Cottaris et al., 2019, Journal of Vision). We fit this model using fractional ridge regression (Rokem & Kay, 2020, GigaScience), and predicted occipital BOLD responses to the color-calibrated natural scene stimuli in the 7T fMRI Natural Scenes Dataset (Allen et al., 2022, Nature Neuroscience). We created a luminance (L+M)-only model without retinal optics as a baseline model. For V1 voxels, adding color information from the ‘cardinal’ retinogeniculate color channels (S/(L+M) and L/(L+M)) increased average prediction accuracy (Pearson's r) by about 20%. Including optical factors using ISETBio to estimate retinal images increased average prediction accuracy a further 5%. Our results show that incorporating color and the retinal image into Gabor wavelet-based encoding models improves prediction of BOLD responses to natural scene stimuli. We conclude that these well-established biologically relevant features of low-level visual signals are important, and can be successfully incorporated in encoding models.

Acknowledgements: The work was funded by ERC grant 949242 COLOURCODE to JMB